Showing posts with label Medicine. Show all posts
Showing posts with label Medicine. Show all posts

Sunday, June 19, 2011

Geneticists discover technique to tackle mutant DNA

Scientists at the University of Rochester believe they have found a way to alter the genes that can cause disease.

Scientists have hit on a genetic trick that opens up fresh avenues for the treatment of devastating diseases, such as cystic fibrosis, muscular dystrophy and certain forms of cancer.
The technique corrects glitches in genetic machinery that cause the body to make faulty versions of proteins that can lead to the onset of disease.
Although the work is at an early stage, the strategy represents a radical new approach to tackling mutations that give rise to an estimated one third of all genetic disorders.

"This is a really powerful concept that can be used to try to suppress the tendency of individuals to get certain debilitating, and sometimes fatal genetic diseases," said Robert Bambara at the University of Rochester Medical Centre, who was not involved in the study.
Proteins are the workhorses of the body and carry out all of the functions necessary for life, from metabolising food to building cells and directing immune attacks on unwelcome invaders. Taken together, the cells of the body make around 20,000 different proteins.

The instructions to make human proteins are carried by around 25,000 genes that are found in almost every cell. To make a protein, each "letter" of a gene must be copied into a single strand of genetic material called messenger RNA (mRNA). The cell then takes this mRNA and uses it as a blueprint to build the protein in a process called translation.
But the business of making proteins does not always proceed smoothly. Mutations in genes or mRNA can give rise to faulty proteins that in many cases trigger disease.
John Karijolich and Yi-Tao Yu at the University of Rochester Medical Centre focused on a type of mutation that causes strands of mRNA to contain premature "halt" signs called stop codons. These order cells to stop making proteins before the job is finished. As a result, affected cells churn out short and incomplete proteins.
Writing in the journal, Nature, the scientists describe a series of experiments in which they used short strands of RNA to correct faulty mRNA, by switching unwanted stop signs into "go" signs. To their surprise, treated cells began to produce healthy, full-length proteins again.

"This is a very exciting finding," Yu said. "No one ever imagined that you could alter a stop codon the way we have and allow translation to continue uninterrupted like it was never there in the first place."
"Our work is still really early with regard to clinical application," Yu told the Guardian. "However, we believe it will eventually offer a potential therapeutic option for premature stop codon-caused diseases, such as cystic fibrosis and muscular dystrophy."

Source The Guardian

Cervical cancer vaccine a success, says Lancet report

Australian study of injection to protect against HPV virus reveals drop in high-grade abnormalities among under-18s.

Vaccinations against the HPV virus which causes cervical cancer have been a success, according to a new study. Photograph: Voisin/Phanie/Rex Features

The first evidence has emerged that nationwide vaccination programmes for young women against HPV, the virus that triggers cervical cancer, are likely to cut the numbers who get the disease.
A study in Australia, one of the first countries to introduce the vaccination, has shown a drop in high-grade cervical abnormalities – changes to the cells in the neck of the womb that can be the precursor to cancer.
Australia introduced nationwide HPV (human papilloma virus) vaccination for women aged 12 to 26 from 2007.

While it will take many years to find out whether vaccination programmes definitely reduce the numbers of cervical cancers in the population, Australian scientists were able to analyse the results from their screening programme to find out whether there has been any drop in the number of young women with abnormal cell changes that are the precursor of cancer.

Publishing in the Lancet medical journal, they report that the proportion of girls aged 17 and younger with high-grade abnormalities fell by almost half, from 0.80% to 0.42%.
But there was no drop in the numbers of women with cervical abnormalities who were older than 17. This is unsurprising since the vaccine is known to be most effective if given to girls before they become sexually active.
That finding, say the authors, "reinforces the appropriateness of the targeting of prophylactic HPV vaccines to pre-adolescent girls".

The findings were greeted with international interest.
"The not-so-cautious optimist in us wants to hail this early finding as true evidence of vaccine effect," write Dr Mona Saraiya and Dr Susan Hariri of the Centres for Disease Control and Prevention in Atlanta, US, in a linked commentary for the journal.
But they said they wanted to know more about the vaccine status of the individuals (each woman is supposed to have three shots) and wanted more work to establish whether the reductions in potential cancers were really a result of vaccination or some other cause.

Michael Quinn, professor of gynaecology and gynaecologic oncology at the University of Melbourne, said: "The study is the first anywhere in the world to show falling rates of high-grade change in very young women.
"Although this is likely to be due to the effects of the vaccination programme, further analysis of information linking women's smear history to their vaccination history will be needed to prove that the fall is entirely due to vaccination rather than other factors."
Public health experts say that women should not assume they are not vulnerable to the disease after vaccination and should still go for regular screening checks.

The UK introduced its own cervical cancer vaccination programme in September 2008, offering the jab in school to 12- and 13-year-old girls, with catch-up programmes for those up to 18.
The cost was expected to be £100m a year. Of the two available vaccines, the UK decided to buy Cervarix, manufactured by the British company GlaxoSmithKline, even though it does not offer the additional protection against genital warts of the alternative, Gardasil.

In spite of worries that parents would refuse to have their daughters vaccinated against what is essentially a sexually-transmitted virus, the take-up has been good, according to figures from the Department of Health.
In the school year 2009/10, more than three-quarters of 12- to 13-year-olds were given all three doses of the vaccine.
• This article was amended on 17 June 20-11. The original included a reference to a fall of 0.38%. This has been corrected.

Source The Guardian

Saturday, June 18, 2011

Chinese medicine offers new Parkinson's treatments

A hooked herb, root extract and a dash of bark – it may sound like a witches' brew, but these compounds could provide treatments for diseases that have so far foiled western doctors, such as Parkinson's and irritable bowel syndrome.

For over 2000 years Chinese doctors have treated "the shakes" – now known as Parkinson's disease – with gou teng, a herb with hook-like branches.
Early this year, 115 people with Parkinson's were given a combination of traditional Chinese medical herbs, including gou teng, or a placebo for 13 weeks. At the end of the study, volunteers who had taken the herbs slept better and had more fluent speech than those taking the placebo.
Gou teng appears to stabilise symptoms, says Li Min, a traditional Chinese doctor at Hong Kong Baptist University. Now, Li and her colleagues have figured out how it might work.

Preserving dopamine

Parkinson's symptoms, such as muscle tremors, slowness of movement and rigidity, are caused by the progressive destruction of brain cells that produce dopamine. Previous work has suggested that an abundance of a protein called alpha-synuclein may be to blame. Current treatments aim to boost levels of dopamine, which only partly alleviates symptoms and does not affect the protein clusters.
It is thought that clumps of alpha-synuclein accumulate because brain cells cannot remove them through autophagy – a type of programmed cell death. Mice without the genes needed for autophagy quickly develop Parkinson's-like symptoms.
According to Li, autophagy is the only known process that gets rid of abnormal proteins within cells. "Enhancing this pathway may be key to treating Parkinson's," she says.
Li's team screened gou teng for its active compounds and tested which of these compounds increase the rate of autophagy and remove alpha-synuclein. To do this, the team added the compounds to human nerve cells and fruit flies that had been genetically modified to develop alpha-synuclein clusters.

Rapamycin connection

One of the compounds, an alkaloid called isorhy, induced autophagy for alpha-synuclein at a similar rate to a drug called rapamycin. Rapamycin is normally used to suppress the immune system in transplant patients, but has recently been touted as a promising candidate for Parkinson's treatment because it prevents nerve cell death in flies with a Parkinson's-like disease. However, because rapamycin depresses the immune system, it would have serious side effects for people with Parkinson's. Gou teng, meanwhile, has been taken for centuries with no apparent side effects.
Further testing found that isorhy activates autophagy through a different pathway to rapamycin, which may explain why it does not affect the immune system in the same way. Li, who recently presented her results at the Keystone Symposia on Molecular and Cellular Biology in Whistler, British Columbia, Canada, will begin trials of Isorhy in rodents later this year.

Herbs for the gut

Meanwhile, Zhaoxiang Bian, also at Hong Kong Baptist University, is developing a drug called JCM-16021 for irritable bowel syndrome (IBS) using seven herbal plants and based on a Chinese formulation called tong xie yao fang, used to treat IBS since the 1300s.

IBS affects up to 20 per cent of people, causing abdominal pain, constipation and diarrhoea. "They feel really rotten, and it's sufficiently severe for people to take time off work," says John Furness at the University of Melbourne, Australia. Stress management can help symptoms, but there is no effective medicine to treat it.
In 2007, Bian gave 80 people with IBS either JCM-16021 with Holopon – a drug that interrupts nerve impulses in the parasympathetic nervous system responsible for digestion – or Holopon alone. After eight weeks, 52 per cent of those given JCM-16021 with Holopon reported reduced IBS symptoms, compared with 32 per cent of those given Holopon alone.
IBS is partly caused by high levels of serotonin in the gut. Last year, Bian found that giving JCM-16021 to rats with IBS-like symptoms broke down serotonin in their bowel faster than normal, reducing their discomfort.
His team has since isolated several active compounds in JCM-16021 that block serotonin's activity in the rat gut, including magnolol, a herb taken from the bark of Magnoliae officinalis.

Root of relief

This month, Keiko Lee at Juntendo University in Tokyo, Japan, found that paeoniflorin, a root extract used in JCM-16021, acts as an analgesic in rats, inhibiting adrenaline receptors in the spine.
Bian is now combining the active extracts of JCM-16021 to develop a new drug that attacks IBS from different angles. Unlike conventional approaches, which target only one aspect of the disease, he believes the combination drug will be more effective.

"I think it is a very rational way to go," says Furness, but warns that combination drugs usually take longer to gain approval because of the greater-than-usual possibility of unexpected side effects. But because these compounds have a long history of being safe for human consumption, it is hoped they will be approved faster, says Li.
"In the past the pharmaceutical industry didn't put much effort into traditional Chinese medicine," says Jing Kang, a biochemist at Harvard Medical School in Boston. "In the past few years this has been changing. More people are paying attention."

Source New Scientist

Thursday, June 16, 2011

After 55 years, surgery restores sight

After being hit in the eye by a stone, a detached retina left a man blind in his right eye. Despite surgery to remove a cataract when the man was 23, which temporarily restored light perception, the patient was completely blind in that eye. Doctors at The New York Eye and Ear Infirmary have reported a case, published in BioMed Central's open access Journal of Medical Case Reports, describing how this patient had functional vision restored 55 years after the childhood accident which left him blind.

Whilst it is unusual for a retina to become detached, common causes include head injury, myopia or diabetes. If a retina remains detached for a prolonged period of time, degenerative changes mean that it is often impossible to restore sight even if the retina is reattached. When the patient arrived at the hospital, complaining of pain, he was found to have total hyphema, neovascular glaucoma, high intraocular pressure and a detached retina. Doctors first treated the pressure to relieve his pain.
Once his eye pressure had stabilized they treated the neovascular glaucoma using monoclonal antibody therapy and found that against all odds the patient regained light perception. Encouraged by these results the doctors decided to try and reattach the retina. After surgery the man recovered his eyesight to such an extent that he could count fingers at a distance of five meters.

A year later the patient required further retinal surgery because scars inside his eye were forcing parts of the retina to become detached again. However this second surgery was also successful. Dr Olusola Olawoye said, "To the best of our knowledge this is the first report of visual recovery in a patient with long-standing traumatic retinal detachment. This is not only a great result for our patient but has implications for restoring eyesight in other patients, especially in the context of stem cell research into retinal progenitor cells which may be able to be transplanted into diseased retinas to restore vision."

Source  EurekaAlert!

Noninvasive brain implant could someday translate thoughts into movement

ANN ARBOR, Mich.---A brain implant developed at the University of Michigan uses the body's skin like a conductor to wirelessly transmit the brain's neural signals to control a computer, and may eventually be used to reactivate paralyzed limbs.

The implant is called the BioBolt, and unlike other neural interface technologies that establish a connection from the brain to an external device such as a computer, it's minimally invasive and low power, said principal investigator Euisik Yoon, a professor in the U-M College of Engineering, Department of Electrical Engineering and Computer Science.
Currently, the skull must remain open while neural implants are in the head, which makes using them in a patient's daily life unrealistic, said Kensall Wise, the William Gould Dow Distinguished University professor emeritus in engineering.

BioBolt does not penetrate the cortex and is completely covered by the skin to greatly reduce risk of infectionResearchers believe it's a critical step toward the Holy Grail of brain-computer interfacing: allowing a paralyzed person to "think" a movement.
"The ultimate goal is to be able to reactivate paralyzed limbs," by picking the neural signals from the brain cortex and transmitting those signals directly to muscles, said Wise, who is also founding director of the NSF Engineering Research Center for Wireless Integrated MicroSystems (WIMS ERC). That technology is years away, the researchers say.

Another promising application for the BioBolt is controlling epilepsy, and diagnosing certain diseases like Parkinson's.
The concept of BioBolt is filed for patent and will be presented on June 16 at the 2011 Symposium on VLSI Circuits in Kyoto, Japan. Sun-Il Chang, a PhD student in Yoon's research group, is lead author on the presentation.
The BioBolt looks like a bolt and is about the circumference of a dime, with a thumbnail-sized film of microcircuits attached to the bottom. The BioBolt is implanted in the skull beneath the skin and the film of microcircuits sits on the brain. The microcircuits act as microphones to 'listen' to the overall pattern of firing neurons and associate them with a specific command from the brain. Those signals are amplified and filtered, then converted to digital signals and transmitted through the skin to a computer, Yoon said.

Another hurdle to brain interfaces is the high power requirement for transmitting data wirelessly from the brain to an outside source. BioBolt keeps the power consumption low by using the skin as a conductor or a signal pathway, which is analogous to downloading a video into your computer simply by touching the video.
Eventually, the hope is that the signals can be transmitted through the skin to something on the body, such as a watch or a pair of earrings, to collect the signals, said Yoon, eliminating the need for an off-site computer to process the signals.

Source EurekaAlert!

Researchers identify protein that improves DNA repair under stress

Findings could lead to treatments to prevent premature aging and cancer

Cells in the human body are constantly being exposed to stress from environmental chemicals or errors in routine cellular processes. While stress can cause damage, it can also provide the stimulus for undoing the damage. New research by a team of scientists at the University of Rochester has unveiled an important new mechanism that allows cells to recognize when they are under stress and prime the DNA repair machinery to respond to the threat of damage. Their findings are published in the current issue of Science.

The scientists, led by biologists Vera Gorbunova and Andrei Seluanov, focused on the most dangerous type of DNA damage – double strand breaks. Unrepaired, this type of damage can lead to premature aging and cancer. They studied how oxidative stress affects efficiency of DNA repair. Oxidative stress occurs when the body is unable to neutralize the highly-reactive molecules, which are typically produced during routine cellular activities.

The research team found that human cells undergoing oxidative stress synthesized more of a protein called SIRT6. By increasing SIRT6 levels, cells were able to stimulate their ability to repair double strand breaks. When the cells were treated with a drug that inactivated SIRT6, DNA repair came to a halt, thus confirming the role of SIRT6 in DNA repair. Gorbunova notes that the SIRT6 protein is structurally related to another protein, SIR2, which has been shown to extend lifespan in multiple model organisms.

"SIRT6 also affects DNA repair when there is no oxidative stress," explains Gorbunova. "It's just that the effect is magnified when the cells are challenged with even small amounts of oxidative stress." SIRT6 allows the cells to be economical with their resources, priming the repair enzymes only when there is damage that needs to be repaired. Thus SIRT6 may be a master regulator that coordinates stress and DNA repair activities, according to Gorbunova.

SIRT6 does not act alone to repair DNA. Gorbunova and her group also showed that, in response to stress, SIRT6 acts on a protein called PARP1 to initiate DNA repair. PARP1 is an enzyme that is one of the "first responders" to DNA damage and is involved in several DNA repair machineries. By increasing the levels of SIRT6, the Rochester team found that cells were able to more rapidly direct DNA repair enzymes to sites of damage and hasten the repair of double strand breaks.

The next step for Gorbunova and Seluanov is to identify the chemical activators that increase the activity of SIRT6. Once that discovery is made, Gorbunova said it may be possible to apply the results to therapies that prevent the onset of certain aging-related diseases.

Source  EurekaAlert!

Beyond Condoms: The Long Quest for a Better Male Contraceptive

A joke among researchers in the field of male contraception is that a clinically approved alternative to condoms or vasectomy has been five to 10 years away for the past 40 years. The so-close-yet-so-far state of male contraceptive development has persisted in large part because of three serious hurdles: the technical challenges of keeping millions of sperm at bay, the stringent safety standards that a drug intended for long-term use in healthy people must meet, and, ultimately, the question of whether men will use it.

Any sex-ed grad can tell you: the only two effective contraceptives for men today are condoms and vasectomy. Condoms have been around for at least 300 years, with early versions made of animal intestines. Today's rubber prophylactics are relatively cheap and widely available, offer bonus protection against sexually transmitted infections, and are 98 percent effective against pregnancy if used properly. On the other hand, surgery to cut the vas deferens (sperm ducts) is nearly foolproof in pregnancy prevention but is usually considered irreversible and tantamount to sterilization. "It's appalling that besides condoms men only have a surgical nonreversible method," says Regine Sitruk-Ware, a reproductive endocrinologist at the Population Council in New York City.

For decades the promise seemed to lie in a hormonal approach—an analogue to the female birth control pill—that would adjust the hormones controlling sperm production. Inconsistent results among men and side effects associated with long-term testosterone use have, however, led some researchers lately to set their sights elsewhere. Newer, nonhormonal methods target various developmental nodes in the formation of sperm, their motility and their egg-penetrating capabilities. There is also work on a form of reversible vasectomy which involves blocking the vas deferens with a polymer gel that may later be dissolved.

Most of the new alternatives under development are geared toward men in long-term relationships who seek a dependable, reversible form of contraception. Increasingly, men want more control over their fertility, and many would like to share the burden of contraception with their female partners. For couples in which the woman cannot handle female birth control for whatever reason—in some women, hormonal contraceptives can cause significant side effects such as bleeding, reduced libido and increased cardiovascular risks; IUDs (intrauterine devices) can cause severe cramps; diaphragms can kill spontaneity and require manual insertion—male contraception may be the best or only option. "It's really an unmet need," Sitruk-Ware says.

About half of pregnancies in the U.S. are unplanned and half of these end in abortion. An effective male contraceptive might have salutary implications for population growth worldwide, but for William Bremner, who leads the Center for Research in Reproduction and Contraception at the University of Washington (U.W.) in Seattle, the goal is providing options to individual couples. "If people had effective methods and real choices, there would be fewer unwanted children and markedly fewer abortions," he says.

Worthy intentions, notwithstanding, the reality is that funding has been a continual challenge for the field. The National Institutes of Health (NIH) currently provides nearly all of the funding for male contraception research in the U.S.—and for some international studies, too. Researchers agree that for a new contraceptive to come to market, support from pharmaceutical companies is a practical necessity, but interest in the industry has been waning in recent years. A major blow came in 2006 when two major companies that had been on board, Schering AG and Organon, shut down their joint hormonal male contraceptive program soon after Schering's acquisition by Bayer. That meant the end of a major funding stream as well as the loss of any research advances that had been made by the project. "Unfortunately, the people who were working on it are under obligation to keep confidential the information, in case they ever go back to it," says Diana Blithe, director of the Male Contraceptive Development Program at the NIH.

Hobbling sperm without hormones
Although none have reached clinical trial stage, nonhormonal methods of male contraception are gaining traction. About three or four years ago, John Amory, a researcher and clinician at U.W. who has been working on hormonal methods for many years, became interested in a nonhormonal target: retinoic acid, a metabolite of vitamin A that is essential for spermatogenesis. In animal models the compound bisdichloroacetyldiamine safely and reversibly induces infertility by inhibiting an enzyme, aldehyde dehydrogenase 1a2, required for retinoic acid synthesis in the testes. Unfortunately, bisdichloroacetyldiamine also inhibits a similar enzyme, aldehyde dehydrogenase 2, required for alcohol metabolism in the liver—meaning that animals on bisdichloroacetyldiamine were unable to process alcohol. "And some would say that if it weren't for alcohol no one would need a contraceptive anyway," jokes Amory, who is working on ways to more specifically inhibit aldehyde dehydrogenase 1a2. In another approach, detailed June 1 in Endocrinology, Debra Wolgemuth's lab at Columbia University used a synthetic retinoid to block retinoid acid receptors, achieving reversible infertility in mice.

Several labs are also looking at ways to thwart sperms' ability to find and swim toward the egg. A group of proteins known as CatSpers controls hyperactivation—the frenzied flagellar beating of sperm tails after ejaculation. Two studies published in March found that progesterone and high-pH, or alkalinity, around an egg act on CatSpers to turn on hyperactivation. Because CatSpers are believed to be found only on sperm, drugs targeted specifically to these proteins would presumably have few side effects elsewhere in the body.

Other agents being investigated, including gamendazole and adjudin, target the Sertoli cells within the testes that provide crucial nourishment to growing sperm. None of these nonhormonal drugs will be tested in humans for at least another two or three years, Sitruk-Ware says. Once a contraceptive target is determined, researchers can use high-throughput screening technology to check thousands of compounds for drug potential.

The dark horse

The most tireless advocate for new male contraceptives may be Elaine Lissner, director of the one-woman operation Male Contraception Information Project, which tries to raise public awareness of nonhormonal male contraceptives. In particular, she has been trumpeting a particular method known as reversible inhibition of sperm under guidance (RISUG). Developed and currently undergoing clinical trials in India, RISUG involves a small incision in the scrotum and injection of a polymer gel into the vas deferens, the same tubes severed in vasectomy. (Vasectomy is reversible in some cases with expensive microsurgery to reconnect the vas deferens. Complications such as anti-sperm antibodies that form when sperm leaks into the body during vasectomy, however, make reversal more than a problem of plumbing.) The porous polymer does not block the flow of sperm but purportedly renders sperm inert by disrupting the chemistry of their cell membranes. Although many researchers appreciate Lissner's advocacy efforts, they do not necessarily share her enthusiasm for RISUG, which is still untested the U.S.

RISUG's fighting chance, touted by its supporters, is its potential reversibility. In nonhuman primates, reversibility has been achieved by dissolving the polymer with an injected solvent. In Amory's view, however, "until they demonstrate reversibility in humans, it's really no different than a vasectomy," although, he adds, "I'd love it if this worked."

Lissner, who is not a scientist herself, bought the international rights to RISUG last year and has created a foundation called Parsemus to develop the procedure in the U.S. That means starting from square one, with toxicology testing and small animal studies. Lissner hopes to eventually get the procedure, now re-branded as Vasalgel, approved as a medical device in the U.S. Before that happens, however, Vasalgel, like all other contenders in the male contraceptive line-up will have to catch the eye of a funding source.

The current status of hormonal methods
The female birth control pill, which went on the market in 1960, increases levels of progesterone to suppress ovulation; similarly, a male hormonal contraceptive would increase levels of testosterone to suppress sperm production. Testosterone inhibits the release of two pituitary hormones, luteinizing hormone (LH) and follicle-stimulating hormone (FSH), which control in the testes testosterone production and spermatogenesis, respectively. Thus, testosterone works in a negative feedback loop with LH and FSH to maintain relatively constant levels of testosterone in the blood. A male contraceptive that delivers extra testosterone into the bloodstream sends a signal to the pituitary to suppress the hormones that promote sperm production.

For women, the birth control pill replicates the body's natural state of infertility—pregnancy—and essentially fools the body into acting as if it were pregnant. "Men don't have an analogous time. After puberty they keep making sperm until they die," Amory explains.

Compared with the one-egg-per-month output of the female reproductive system, the roughly 1,000-sperm-per-heartbeat output of the male reproductive system is "a quantitatively challenging problem" for contraceptive research, Amory says. Thankfully for Amory's cohort, effective male contraception does not require complete obliteration of sperm production. Only about 5 percent of sperm are functional to begin with, Amory estimates, and very few of these high-quality sperm will survive the arduous journey to the egg. Lowering sperm count to less than one million per milliliter of ejaculate from the normal range of 20 million to 30 million per milliliter results in de facto infertility.

Though often referred to as the "male pill," male hormonal contraceptives in development are mostly synthetic testosterone delivered in the form of injections, slow-release implants or rub-on gels that absorb through the skin. (Oral ingestion of testosterone is less effective because much of the hormone is then broken down by the liver.) Adding progesterone (a female sex hormone), which also suppresses spermatogenesis, to a testosterone regimen improves contraceptive outcomes. The testosterone–progesterone combination achieves effective contraception for more than 90 percent of men—but for reasons that are still unclear, there are always some men for whom sperm production is insufficiently suppressed. For comparison, the female pill is about 98 percent effective when taken correctly.

In April a clinical trial of injections of long-acting progestin (synthetic progesterone) and testosterone was ended early due to higher than expected rates of minor side effects such as irritability and acne among the 321 participants. The trial was a collaboration between the World Health Organization and CONRAD, an Arlington, Va.–based nonprofit that supports reproductive health research. Douglas Colvard, deputy director of programs at CONRAD, expressed disappointment at the end of the trial but was optimistic there would be valuable data from the third of participants who had completed 12 months of injections.

A clinical trial of a contraceptive implant, led by the Population Council, the University of California, Los Angeles, and U.W., will begin late this year or early 2012, according to Sitruk-Ware. The implant, which is matchstick-size and placed under the skin of the upper arm, contains a modified synthetic steroid that resembles testosterone but should not have the same effect on prostate growth sometimes associated with testosterone treatments.

"The idea is a good one," Amory says of male hormonal contraception, "and it works most of the time, but not well enough for a pharmaceutical company to jump in and put some money and time into it."

Do men really want it?
When asked whether a new contraceptive will appeal to men, researchers are quick to point out that men are already responsible for 30 percent of contraception in developed countries (and 14 percent in developing countries), split about evenly between condoms and vasectomies. Even if that is the minority of sexual partners, those figures still add up to hundreds of millions of men.

A 2002 survey of 9,000 men in nine countries across four continents found that more than 55 percent of men would be willing to use a hormonal form of contraception. In a 1996 survey of nearly 2,000 women in Scotland, China and South Africa 87 percent thought that a hormonal male contraceptive was "a good idea" and 98 percent of women said they would trust their partners to use a hypothetical "male pill". "Of course, we don't really know for sure what people will do," Amory says. "All surveys have that limitation."

The risk–benefit analysis for male contraceptives is different from that of female contraceptives because at the end of the day, men are not the ones getting pregnant, Colvard says. For that reason, future male contraceptives may come with incentives other than pregnancy prevention: side benefits such as muscle gain, fat loss and even baldness prevention.

(Of course, infertility is a well-known side effect of testosterone doping in athletes. Although testosterone used for contraceptive purposes would show up on a drug test, according to Amory, the levels are far below those needed for significant muscle enhancement.)

Although many men may welcome new contraceptive options, there is not the same momentum that pushed female contraception. "We don't see groups of men going on the streets," Sitruk-Ware says. "On the other hand, when we do clinical trials in various countries the men are very interested."

For now, researchers and consumers can only assume that when presented with a full pipeline of new drugs and better data on the safety, efficacy and public acceptability of male contraceptives, pharmaceutical companies will eventually see an opportunity for their profit margins. The hope is, "If you make it, they will come," NIH's Blithe says.

Source Scientific American

Wednesday, June 15, 2011

Mother-to-daughter womb transplant maybe next year

Has a successful womb transplant actually been done?
No, but a team led by Mats Brännström of the University of Gothenburg's Sahlgrenska Hospital in Sweden is preparing to try early next year. He told New Scientist that his team is reviewing 10 potential patients, and hoping to transplant wombs into maybe five or six who are most suitable.

So why all the fuss now?
One of the potential donors, a British 56-year-old called Eva Ottosson, told journalists about a proposal to donate her womb to her 25-year-old daughter, Sara, who lives in Stockholm, Sweden. Sara has a condition called Mayer-Rokitansky-Kuster-Hauser syndrome, which means she has no uterus herself, and is also missing parts of her vagina. If Sara is chosen for the procedure and it works, her eggs will be fertilised by her partner's sperm and implanted in the same womb from which she herself was born.

Has a womb transplant been attempted before?
Yes. In 2000, Saudi Arabian surgeons implanted a womb into a 26-year-old woman who had had her own uterus removed at age 20 because of serious bleeding following a caesarean section. But they had to remove it 99 days later because of blood clots in associated blood vessels. The donor was a 46-year-old who had been advised to have a hysterectomy because of ovarian cysts. The news came to light in 2002 at a scientific meeting.

How successful has the procedure been in animals?
Brännström's group has done a series of experiments in progressively larger animals. In 2002, mice with transplanted wombs successfully gave birth to pups, and a year later Brännström revealed that the pups were healthy and able to breed normally. Brännström told New Scientist today that since then, he has successfully transplanted wombs into sheep and baboons, always from related donors. In much more recent, unpublished research, however, he demonstrated in rats that it's possible to transplant wombs from unrelated females.

When it comes to people, what will the procedure involve?
Brännström says he will transplant the womb itself, plus all uterine arteries and veins to supply and drain blood from the organ. No nerves will be transplanted. Then the recipient will receive low doses of immunosuppressive drugs to prevent rejection. He expects the organ will be accepted more easily than most transplants because pregnancy itself is an immunoprivileged condition, in which foreign material from the father is accepted by the body's immune system. An immediate pregnancy "will probably help the uterus to be accepted", he says.

What are the major hurdles?
Brännström says that the surgery itself will be the most difficult step. Compared to other, relatively isolated organs, such as the kidneys, the uterus is deeply embedded and hard to get at, and so may be technically difficult to transplant. "But we've overcome it in all animal models," he says.
And the risks?
Rejection is the main worry. And as with all pregnancies, there are risks of hypertension, diabetes and many other complications.

If a woman has no womb at all, or one that's damaged, wouldn't it be simpler just to fertilise her eggs and implant them in the womb of a surrogate mother?
"That would be a reasonable alternative," says Brännström. But in many countries, including Sweden, surrogacy is illegal, he says. Also, there may be extra physical strain and risks for older women, such as Sara's mother, in carrying babies – although Brännström acknowledges that surgery to remove the organ is also risky for older donors.

Is anyone else attempting this?
Other groups investigating the possibility include one led by Richard Smith of the Chelsea and Westminster Hospital in London, and another led by Giuseppe Del Priore at the New York Downtown Hospital.

So will it be an unseemly race to be first?
Brännström says not. He says the teams all know each other and cooperate, and all are keen for the procedure to work, whoever does it first.

Finally, will scientists ever develop an artificial womb?
Far fetched. Forget Brave New World for now – although in 1992, Japanese researchers did successfully sustain a goat fetus to term in a tank of nutrients, the nearest thing yet to an artificial womb. The fetus had been removed from the mother about three-quarters of the way through pregnancy.

Source New Scientist

Saturday, June 11, 2011

Bipolar kids: Victims of the 'madness industry'?

THERE'S a children's picture book in the US called Brandon and the Bipolar Bear. Brandon and his bear sometimes fly into unprovoked rages. Sometimes they're silly and overexcited. A nice doctor tells them they are ill, and gives them medicine that makes them feel much better.

The thing is, if Brandon were a real child, he would have just been misdiagnosed with bipolar disorder.
Also known as manic depression, this serious condition, involving dramatic mood swings, is increasingly being recorded in American children. And a vast number of them are being medicated for it.

 Kids' stuff?

The problem is, this apparent epidemic isn't real. "Bipolar emerges from late adolescence," says Ian Goodyer, a professor in the department of psychiatry at the University of Cambridge who studies child and adolescent depression. "It is very, very unlikely indeed that you'll find it in children under 7 years."
How did this strange, sweeping misdiagnosis come to pass? How did it all start? These were some of the questions I explored when researching The Psychopath Test, my new book about the odder corners of the "madness industry".

Freudian slip

The answer to the second question turned out to be strikingly simple. It was really all because of one man: Robert Spitzer.
I met Spitzer in his large, airy house in Princeton, New Jersey. In his eighties now, he remembered his childhood camping trips to upstate New York. "I'd sit in the tent, looking out, writing notes about the lady campers," he said. "Their attributes." He smiled. "I've always liked to classify people."
The trips were respite from Spitzer's "very unhappy mother". In the 1940s, the only help on offer was psychoanalysis, the Freudian-based approach of exploring the patient's unconscious. "She went from one psychoanalyst to another," said Spitzer. He watched the psychoanalysts flailing uselessly. She never got better.
Spitzer grew up to be a psychiatrist at Columbia University, New York, his dislike of psychoanalysis remaining undimmed. And then, in 1973, an opportunity to change everything presented itself. There was a job going editing the next edition of a little-known spiral-bound booklet called DSM - the Diagnostic and Statistical Manual of Mental Disorders.

DSM is simply a list of all the officially recognised mental illnesses and their symptoms. Back then it was a tiny book that reflected the Freudian thinking predominant in the 1960s. It had very few pages, and very few readers.
What nobody knew when they offered Spitzer the job was that he had a plan: to try to remove human judgement from psychiatry. He would create a whole new DSM that would eradicate all that crass sleuthing around the unconscious; it hadn't helped his mother. Instead it would be all about checklists. Any psychiatrist could pick up the manual, and if the patient's symptoms tallied with the checklist for a particular disorder, that would be the diagnosis.
For six years Spitzer held editorial meetings at Columbia. They were chaos. The psychiatrists would yell out the names of potential new mental disorders and the checklists of their symptoms. There would be a cacophony of voices in assent or dissent - the loudest voices getting listened to the most. If Spitzer agreed with those proposing a new diagnosis, which he almost always did, he'd hammer it out instantly on an old typewriter. And there it would be, set in stone.

That's how practically every disorder you've ever heard of or been diagnosed with came to be defined. "Post-traumatic stress disorder," said Spitzer, "attention-deficit disorder, autism, anorexia nervosa, bulimia, panic disorder..." each with its own checklist of symptoms. Bipolar disorder was another of the newcomers. The previous edition of the DSM had been 134 pages, but when Spitzer's DSM-III appeared in 1980 it ran to 494 pages.
"Were there any proposals for mental disorders you rejected?" I asked Spitzer. "Yes," he said, "atypical child syndrome. The problem came when we tried to find out how to characterise it. I said, 'What are the symptoms?' The man proposing it replied: 'That's hard to say because the children are very atypical'."
He paused. "And we were going to include masochistic personality disorder." He meant battered wives who stayed with their husbands. "But there were some violently opposed feminists who thought it was labelling the victim. We changed the name to self-defeating personality disorder and put it into the appendix."

DSM-III was a sensation. It sold over a million copies - many more copies than there were psychiatrists. Millions of people began using the checklists to diagnose themselves. For many it was a godsend. Something was categorically wrong with them and finally their suffering had a name. It was truly a revolution in psychiatry.
It was also a gold rush for drug companies, which suddenly had 83 new disorders they could invent medications for. "The pharmaceuticals were delighted with DSM," Spitzer told me, and this in turn delighted him: "I love to hear parents who say, 'It was impossible to live with him until we gave him medication and then it was night and day'."

Spitzer's successor, a psychiatrist named Allen Frances, continued the tradition of welcoming new mental disorders, with their corresponding checklists, into the fold. His DSM-IV came in at a mammoth 886 pages, with an extra 32 mental disorders.
Now Frances told me over the phone he felt he had made some terrible mistakes. "Psychiatric diagnoses are getting closer and closer to the boundary of normal," he said.
"Why?" I asked. "There's a societal push for conformity in all ways," he said. "There's less tolerance of difference. Maybe for some people having a label confers a sense of hope - previously I was laughed at but now I can talk to fellow sufferers on the internet."
Part of the problem is the pharmaceutical industry. "It's very easy to set off a false epidemic in psychiatry," said Frances. "The drug companies have tremendous influence."
One condition that Frances considers a mistake is childhood bipolar disorder. "Kids with extreme temper tantrums are being called bipolar," he said. "Childhood bipolar takes the edge of guilt away from parents that maybe they created an oppositional child."

"So maybe the diagnosis is good?"
"No," Frances said. "And there are very good reasons why not." His main concern is that children whose behaviour only superficially matches the bipolar checklist get treated with antipsychotic drugs, which can succeed in calming them down, even if the diagnosis is wrong. These drugs can have unpleasant and sometimes dangerous side effects.

Knife edge

The drug companies aren't the only ones responsible for propagating this false epidemic. Patient advocacy groups can be very fiery too. The author of Brandon and the Bipolar Bear, Tracy Anglada, is head of a childhood bipolar advocacy group called BP Children. She emailed me that she wished me all the best with my project but she didn't want to be interviewed. If, however, I wanted to submit a completed manuscript to her, she added, she'd be happy to consider it for review.
Anglada's friend Bryna Hebert has also written a children's book: My Bipolar, Roller Coaster, Feelings Book. "Matt! Will you take your medicines please?" she called across the kitchen when I visited her at home in Barrington, Rhode Island. The medicines were lined up on the kitchen table. Her son Matt, 14 years old, took them straight away.

The family's nickname for baby Matt had been Mister Manic Depressive. "Because his mood would change so fast. He'd be sitting in his high chair, happy as a clam; 2 seconds later he'd be throwing things across the room. When he was 3 he'd hit and not be sorry that he hit. He was obsessed with vampires. He'd cut out bits of paper and put them into his teeth like vampire teeth and go up to strangers. Hiss hiss hiss. It was a little weird."
"Were you getting nervous?" I asked. "Yeah," said Hebert. "One day he wanted some pretzels before lunch, and I told him no. He grabbed a butcher knife and threatened me."

"How old was he?"

"Four. That was the only time he's ever done anything that extreme," she said. "Oh, he's hit his sister Jessica in the head and kicked her in the stomach."
"She's the one who punched me in the head," called Matt from across the room.
It was after the knife incident, Hebert said, they took him to be tested. As it happened, the paediatric unit at what was then their local hospital, Massachusetts General, was run by Joseph Biederman, the doyen of childhood bipolar disorder. According to a 2008 article in the San Francisco Chronicle, "Biederman's influence is so great that when he merely mentions a drug during a presentation, tens of thousands of children will end up taking it." Biederman has said bipolar disorder can start, "from the moment the child opens his eyes".

"When they were testing Matt he was under the table, he was on top of the table," said Hebert. "We went through all these checklists. One of Dr Biederman's colleagues said, "We really think Matt meets the criteria in the DSM for bipolar disorder."
That was 10 years ago and Matt has been medicated ever since. So has his sister Jessica, who was also diagnosed by Biederman's people as bipolar. "We've been through a million medications," said Hebert. "There's weight gain. Tics. Irritability. Sedation. They work for a couple of years then they stop working."
Hebert was convinced her children were bipolar, and I wasn't going to swoop into a stranger's home for an afternoon and tell her they were normal. That would have been incredibly patronising and offensive. Plus, as the venerable child psychiatrist David Shaffer told me when I met him in New York later that evening, "These kids can be very oppositional, powerful kids who can take years off your happy life. But they aren't bipolar."

"Attention-deficit disorder?" he said. "Often with an ADD kid you think: 'My God, they're just like a manic adult.' But they don't grow up manic. And manic adults weren't ADD when they were children. But they're being labelled bipolar.
"That's an enormous label that's going to stay with you for the rest of your life. You're being told you have a condition which is going to make you unreliable, prone to terrible depressions and suicide."
The debate around childhood bipolar is not going away. In 2008, The New York Times published excerpts from an internal hospital document in which Biederman promised to "move forward the commercial goals of Johnson & Johnson", the firm that funds his hospital unit and sells the antipsychotic drug Risperdal. Biederman has denied the allegations of conflict of interest.

Frances has called for the diagnosis of childhood bipolar to be thrown out of the next edition of DSM, which is now being drawn up by the American Psychiatric Association.
This article shouldn't be read as a polemic against psychiatry. There are a lot of unhappy and damaged people out there whose symptoms manifest themselves in odd ways. I get irritated by critics who seem to think that because psychiatry has elements of irrationality, there is essentially no such thing as mental illness. There is. Childhood bipolar, however, seems to me an example of things having gone palpably wrong.
On the night of 13 December 2006, in Boston, Massachusetts, 4-year-old Rebecca Riley had a cold and couldn't sleep. Her mother, Carolyn Riley, gave her some cold medicine, and some of her bipolar medication, and told her she could sleep on the floor next to the bed. When she tried to wake Rebecca the next morning, she discovered her daughter was dead.

The autopsy revealed that Rebecca's parents had given her an overdose of the antipsychotic drugs she had been prescribed for her bipolar disorder. They had got into the habit of feeding her the medicines to shut her up when she was being annoying. They were both convicted of Rebecca's murder.
Rebecca had been diagnosed as bipolar at 2-and-a-half, and given medication by an upstanding psychiatrist who was a fan of Biederman's research into childhood bipolar. Rebecca had scored high on the DSM checklist, even though like most toddlers she could barely string a sentence together.

Shortly before her trial, Carolyn Riley was interviewed on CBS's 60 Minutes show by Katie Couric:
KC: Do you think Rebecca really had bipolar disorder?
CR: Probably not.             
KC: What do you think was wrong with her now?
CR: I don't know. Maybe she was just hyper for her age.

Jon Ronson is a writer and documentary maker living in London. He is the author of five books, including The Men Who Stare at Goats. His latest book, The Psychopath Test, is about the psychiatry industry

Turning off cancer’s growth signals

Biological engineers’ new approach to shutting down cell division could lead to new cancer drugs.

One hallmark of cancer cells is uncontrollable growth, provoked by inappropriate signals that instruct the cells to keep dividing. Researchers at MIT and Brigham and Women’s Hospital have now identified a new way to shut off one of the proteins that spreads those signals — a receptor known as HER3.

A microscopy image of an ovarian adenocarcinoma. MIT researchers have found a new way to disrupt a protein often overexpressed in ovarian tumors, known as HER3.

Drugs that interfere with HER3’s better-known cousins, EGFR and HER2, have already proven effective in treating many types of cancer, and early-stage clinical trials are underway with antibodies directed against HER3. HER3 is of great interest to cancer biologists because it is commonly involved in two of the deadliest forms of the disease, ovarian and pancreatic cancer, says MIT Professor Linda Griffith, who led the research team with Harvard Stem Cell Institute and Brigham and Women’s cardiologist Richard Lee.

The study, published online May 26 in the Journal of Biological Chemistry, resulted from a serendipitous finding in a regenerative-medicine project. Co-first author Luis Alvarez, who earned his PhD from MIT during a three-year leave from the Army, was interested in regenerative medicine because he knew many soldiers who had been wounded in Iraq and Afghanistan.

While looking for ways to promote bone regrowth, Alvarez developed a series of paired proteins that the researchers thought might promote interactions between growth receptors such as HER3 and EGFR to control growth and differentiation.

Alvarez’s proteins had some impact on regeneration, but the researchers also noticed that in some cases, they appeared to shut off cell growth and migration. Alvarez and others in Griffith’s lab decided to see what would happen if they treated cancer cells with the protein. To their surprise, they found that the cells stopping growing, and in some cases died.

“It was not something we were expecting to see — you don’t expect to shut off a receptor with something that normally activates it — but in retrospect it seemed obvious to try this approach for HER3,” says Griffith, the School of Engineering Professor of Innovative Teaching in MIT’s Department of Biological Engineering and director of the Center for Gynepathology Research. “We pursued it only because we had people in the lab working with cancer cells, and we thought, ‘Since it had these effects in stem cells, let’s just try this in tumor cells, and see if something interesting happens.’”

Targeting vulnerability

Around the same time, Griffith developed a personal interest in this family of cell receptors: She was diagnosed with a form of breast cancer that often overexpresses the receptor EGFR.

EGFR has received much attention from biologists — the cancer drugs Erbitux, Iressa and Tarceva all target it — but not all cancers that overexpress the EGFR respond to targeted therapies. The first highly successful targeted chemotherapy, Herceptin, goes after another member of the family, the HER2 receptor.

The new MIT protein targets a specific vulnerability of HER3: To convey its growth-stimulating signals to the rest of the cell, HER3 must pair up with another receptor, usually HER2.

The new protein, which consists of a fused pair of neuregulin molecules, disrupts that pairing. Single molecules of neuregulin normally stimulate the HER3 receptor, promoting cell growth and differentiation. However, when the paired neuregulin is given to cells, it binds together two adjacent HER3 receptors, preventing them from interacting with the HER2 receptors they need to send their signals.

The researchers tested the molecule in six different types of cancer cells that overexpress HER3, and found that it effectively shut off growth in all of them, including a cell type that is resistant to drugs that target EGFR.

Mark Moasser, a professor of oncology at the University of California at San Francisco, described the new technique as clever and elegant, adding that more experiments are needed to determine if it will be effective in living organisms. “Based on the mechanism, it has potential, and it lays the groundwork for a lot of future work,” says Moasser, who was not involved in this study.

The MIT and Brigham and Women’s team is now working on a new version of the molecule that would be more suited to tests in living animals. They plan to undertake such testing soon under the leadership of Steven Jay, a joint MIT/Brigham and Women’s postdoc and co-first author of the new paper. MIT postdoc Elma Kurtagic and graduate student Seymour de Picciotto are also first authors of the paper.

Source MIT

Thursday, June 9, 2011

Physician participation in lethal injection executions should not be banned, argue 2 ethicists

(Garrison, NY) Should physicians be banned from assisting in a lethal injection execution, or lose professional certification for doing so? A recent ruling by the American Board of Anesthesiology will revoke certification of anesthesiologists who participate in capital punishment, and other medical boards may act similarly. An article in the Hastings Center Report concludes that decertification of physicians participating in lethal injections by a professional certifying organization goes too far—though individual physicians and private medical groups like the AMA are entitled to oppose the practice and may censure or dismiss members who violate it.

Physician participation in execution by lethal injection has always been controversial. All 34 death-penalty states use lethal injections for executions—and 33 of these allow or require physicians to participate. Kentucky is the only state that forbids physicians from participating in lethal injection executions. In 2008, when the Supreme Court upheld, in Baze v Rees, Kentucky's execution process as constitutional, the path seemed clear for lethal injections to proceed without physician involvement. But this didn't happen. As Lawrence Nelson and Brandon Ashby report in their article, "the protocols for almost all states still leave a place for physicians, apparently on grounds that physicians have the special ability to help the prisoner die swiftly and quietly, making the execution more humane for the prisoner, more efficient overall, and (to be frank) less disturbing for everyone who witnesses or has a hand in it."

The authors review the arguments against physician participation, particularly that it is inconsistent with the goals of medicine to help and not harm people—and that the record of botched executions constitutes one of the strongest arguments in favor of participation. "Acknowledging the ability of physicians to reduce needless risk to the condemned," they conclude, "we believe the most that can be fairly said is that physician participation neither fully advances the ethical ideals of medicine nor is strictly anathema to them."
Lawrence Nelson is an associate professor of philosophy at Santa Clara University and a faculty scholar in the Markkula Center for Applied Ethics. Brandon Ashby is a graduate student with the faculty of philosophy at Oxford University, Lady Margaret Hall.

In their report, the authors find that arguments for and against physician participation in executions often get conflated with arguments about the broader question of the ethics of capital punishment. While they acknowledge that "reasonable people of good faith may disagree on the morality and efficacy of capital punishment," the fact is that lethal injection executions continue to occur-- with little prospect of ending soon. Forty such executions took place in the United States in 2010 and eight during the first two months of 2011. Over 20 are scheduled for the remainder of 2011.

The report examines the role that the state expects the physician to play. A newly opened facility in California, for instance, cost over $800,000 and is designed solely for performing executions efficiently, humanely, and in accordance with constitutional requirements. Yet the roles specified for the physicians in the California regulations involve activities expressly barred by the American Medical Association's Code of Ethics.
"As far as we can determine," Nelson and Ashby write, "no physician has lost his or her ability to practice medicine or been dismissed from a professional medical organization as a result of participation in executions." But this may change. In February 2010, the American Board of Anesthesiology ruled that no anesthesiologists may "participate in capital punishment if they wish to be certified by the ABA." And other specialty boards may follow suit.

Such new sanctions go beyond losing membership in a medical society. "Loss of board certification directly affects a physician's ability to practice medicine and attract patients, given that many institutions and patients will not enter into a relationship with a physician lacking this credential of professional competence and accomplishment. . . The ABA's action creates a significant conflict between the important interest of professional certifying boards in enforcing ethical standards and the commitment of the state to the effective, humane, and just administration of the criminal law," the article states.
Will states be able to get physicians into the death chamber if by doing so they lose their practice? The authors cite the states of Washington and Oregon as offering one possible solution. As part of the Death with Dignity laws authorizing physician-assisted suicide, these states have included provisions explicitly forbidding organized medicine from punishing participating physicians.

Nelson and Ashby support the need for medical associations to establish professional guidelines, but they believe that depriving a physician of his or her livelihood is too onerous a penalty. There are other ways for professional associations to achieve their goals: "If a profession's ethical standards ought to emerge out of a dialogue between the profession and the larger community it serves, then organized medicine, individual physicians, and the people in the thirty-four state that allow or require physician participation in executions out to engage in public debate aimed at reaching a practical and principled resolution of this chronic conflict."

Source EurekaAlert!

Why animals don't have infrared vision

Johns Hopkins researchers uncover the source of the visual system's 'false alarms'.

On rare occasion, the light-sensing photoreceptor cells in the eye misfire and signal to the brain as if they have captured photons, when in reality they haven't. For years this phenomenon remained a mystery. Reporting in the June 10 issue of Science, neuroscientists at the Johns Hopkins University School of Medicine have discovered that a light-capturing pigment molecule in photoreceptors can be triggered by heat, as well, giving rise to these false alarms.

"A photon, the unit of light, is just energy, which, when captured by the pigment rhodopsin, most of the time causes the molecule to change shape, then triggering the cell to send an electrical signal to the brain to inform about light absorption," explains King-Wai Yau, Ph.D., professor of neuroscience at Johns Hopkins and member of its Center for Sensory Biology. "If rhodopsin can be triggered by light energy," says Yau, "it may also be occasionally triggered by other types of energy, such as heat, producing false alarms. These fake signals compromise our ability to see objects on a moonless night. So we tried to figure it out; namely, how the pigment is tripped by accident."

"Thermal energy is everywhere, as long as the temperature is above absolute zero," says neuroscience research associate Dong-Gen Luo, Ph.D. "The question is: How much heat energy would it take to trigger rhodopsin and enable it to fire off a signal, even without capturing light?" says Johns Hopkins Biochemistry, Cellular and Molecular Biology graduate student Wendy Yue.
For 30 years, the assumption was that heat could trigger a pigment molecule to send a false signal, but through a mechanism different from that of light, says Yau, because it seemed, based on theoretical calculations: that very little thermal energy was required compared to light energy.

But the theory, according to Yau, was based mainly on the pigment rhodopsin. However, rhodopsin is mainly responsible for seeing in dim light and is not the only pigment in the eye; other pigments are present in red-, green- and blue-sensitive cone photoreceptors that are used for color and bright-light vision. Although researchers are able to measure the false events of rhodopsin from a single rhodopsin-containing cell, a long-standing challenge has been to take measurements of the other pigments. "The electrical signal from a single cone pigment molecule is so small in a cone cell that it is simply not measurable," says Luo. "So we had to figure out a new way to measure these false signals from cone pigments."
By engineering a rod cell to make human red cone pigment, which is usually only found in cone cells, Yau's team was able to measure the electrical output from an individual cell and calculate this pigment's false signals by taking advantage of the large and detectable signals sent out from the cell.

As for blue cone pigment, "Nature did the experiment for us," says Yau. "In many amphibians, one type of rod cells called green rods naturally express a blue cone pigment, as do blue cones." So to determine whether heat can cause pigment cells to misfire, the team, working in the dark, first cooled the cells, and then slowly returned the cells to room temperature, measuring the electrical activity of the cells as they warmed up. They found that red-sensing pigment triggers false alarms most frequently, rhodopsin (bluish-green-sensing pigment) triggers falsely less frequently, and blue-sensing pigment does so even less.

"This validates the 60-year-old Barlow's hypothesis that suggested the longer wavelength the pigment senses—meaning the closer to the red end of the spectrum—the noisier it is," says Yau. And this finding led the team to develop and test a new theory: that heat can trigger pigments to misfire, by the same mechanism as light.
Pivotal to this theory is that visual pigment molecules are large, complex molecules containing many chemical bonds. And since each chemical bond has the potential to contain some small amount of thermal energy, the total amount of energy a pigment molecule could contain can, in theory, be enough to trigger the false alarm.
"For a long time, people assumed that light and heat had to trigger via different mechanisms, but now we think that both types of energy, in fact, trigger identical changes in the pigment molecules," says Yau. Moreover, since longer wavelength pigments have higher rates of false alarms, Yau says this may explain why animals never evolved to have infrared-sensing pigments.

"Apart from putting to rest a long-standing debate, it's a wake-up call for researchers to realize that biomolecules in general have more potential thermal energy than previously thought," says Luo.

Source  EurekaAlert!

Tuesday, June 7, 2011

Universal flu vaccine clinical trials show promise

Vaccine candidate produces immune response to antigen in all strains of influenza A.

GALVESTON, Texas — A universal influenza vaccine targeting a protein common to all strains of influenza A has safely produced an immune response in humans. If proven effective, the vaccine could eliminate the practice of creating a new flu vaccine annually to match predicted strains, with major implications for global health.
The results of the clinical trials, led by the University of Texas Medical Branch at Galveston in collaboration with biotechnology company VaxInnate and funded by $9.5 million grant from the Bill and Melinda Gates Foundation, were published today online in the journal Vaccine.

The vaccine candidate, VAX102, targets a protein known as M2e, found on the surface of the influenza A virus, that has remained relatively unchanged over the last century. VAX102 consists of 4 copies of M2e fused to the protein flagellin, a TLR5 ligand used as an adjuvant. The M2e antigen had been completely unchanged from 1918 until the recent pandemic, making it of interest to researchers searching for a target for the immune response to influenza that would be stable over many seasons.

Unlike traditional flu vaccines, which target antigens that change continuously, the prototype VAX102 represents a vaccine that would not require annual updates, an important barrier to influenza prevention throughout the world. The technology used to produce the candidate vaccine would eliminate many of the limitations of current influenza vaccines, including inefficiencies related to manufacturing – such as limited production capability and the inability to change the target antigen should the vaccine not match the circulating strains.
"As we saw in the 2009 influenza pandemic, there is a great public and global health need for a rapid, scalable model for vaccine production," said lead author Christine B. Turley, M.D., Vice Chair for Clinical Services, Department of Pediatrics and a member of UTMB's Sealy Center for Vaccine Development. "If ultimately proven effective, VAX102 will meet this need and offer a completely new approach to global flu prevention and control."

Two studies, conducted at UTMB and Johnson County Clin-Trials in Lenexa, Kansas, assessed the safety, tolerability and immunogenicity – the induced immune response – of VAX102.
Healthy adults ages 18-49 were randomly assigned to receive two doses of either vaccine or placebo. The two studies established the dose range for further study. Doses ranging from 0.03 to 10 micrograms were studied. Individuals at the highest doses had more systemic reactions; doses of 1 microgram or less were safe. All vaccinated subjects showed some degree of antibody response, with a more than four-fold increase noted in all groups by 14 days after the second dose of vaccine.

An important next step will be studies to determine the degree to which the vaccine may be effective against influenza infection. Future studies would also investigate the durability of the antibody response and more closely assess cytokine responses – proteins released as part of the immune response – in an effort to better understand, predict and potentially prevent the adverse reactions noted at highest doses.
Pending results of future trials, VAX102 could be used as a stand-alone vaccine to prevent influenza A infection. Other possible strategies include use in conjunction with vaccines that target traditional influenza antigens, as a part of an approach to increase efficacy when infection occurs with mismatched strains.
VAX102 efficacy would have major global health implications, as worldwide annual influenza vaccination is not currently available due to limitations of licensed vaccines and international immunization infrastructure.
According to Turley, an influenza vaccine that can be produced rapidly and with great economies of scale, such as VAX102 through simple bacterial fermentation, allows for an entirely new approach to international influenza control. Further, because the M2e-based vaccine would not require annual updates, it could be useful to offer protection over multiple influenza seasons.

Finally, VAX102 holds promise as an improved vaccine for the elderly. "Our immune response deteriorates with age," said Turley. "Currently, the elderly aren't afforded as much protection from the flu vaccine as younger individuals. Rather than giving the elderly higher doses of a vaccine each year, VAX102 could afford long-term protection or be used as a booster strategy, maximizing immune memory."

Source  EurekaAlert!

Monday, June 6, 2011

Tai chi could be key to overcoming cognitive effects of chemotherapy

COLUMBIA, Mo. -- According to the American Cancer Society, more than 11.4 million Americans are currently living with cancer. While cancer treatments are plentiful, many have negative side effects. Previous studies have indicated that a significant number of patients who receive chemotherapy also experience cognitive declines, including decreases in verbal fluency and memory. Now, one University of Missouri health psychologist has found evidence that indicates Tai Chi, a Chinese martial art, might help overcome some of those problems.

"Scientists have known for years that Tai Chi positively impacts physical and emotional health, but this small study also uncovered evidence that it might help cognitive functioning as well," said Stephanie Reid-Arndt, assistant professor and chair of the Department of Health Psychology in the School of Health Professions. "We know this activity can help people with their quality of life in general, and with this new study, we are encouraged about how Tai Chi could also help those who have received chemotherapy. I also hope this encourages more people to think about Tai Chi positively on a broader scale in their lives."

Tai Chi involves practicing slow motion routines and is based on several principles, including mindfulness, breathing awareness, active relaxation and slow movements. The emphasis on slow movement makes Tai Chi particularly suited to a wide range of fitness levels, which makes it very relevant for those who have had chemotherapy and might be experiencing physical limitations as a result, Reid-Arndt said.

The MU pilot study followed a group of women with a history of chemotherapy. The women participated in a 60-minute Tai Chi class two times a week for 10 weeks. The women were tested on memory, language, attention, stress, mood and fatigue before and after the 10-week sessions. According to Reid-Arndt, the results of the tests indicated that the women had made significant improvements in their psychological health and cognitive abilities.

"Tai Chi really helps individuals focus their attention, and this study also demonstrates how good Tai Chi could be for anyone, whether or not they have undergone treatment for cancer," Reid-Arndt said. "Due to the small size of this study, we really need to test a larger group of individuals to gain a better understanding of the specific benefits of this activity for patients who have been treated with chemotherapy and how significant these improvements might be."

Source  EurekaAlert!

Scientists use super microscope to pinpoint body’s immunity 'switch'

Molecular mechanism driving the immune response identified for the first time.

Using the only microscope of its kind in Australia, medical scientists have been able for the first time to see the inner workings of T-cells, the front-line troops that alert our immune system to go on the defensive against germs and other invaders in our bloodstream.
The discovery overturns prevailing understanding, identifying the exact molecular 'switch' that spurs T-cells into action — a breakthrough that could lead to treatments for a range of conditions from auto-immune diseases to cancer.

The findings, by researchers at the University of New South Wales (UNSW), are reported this week in the high-impact journal Nature Immunology.
Studying a cell protein important in early immune response, the researchers led by Associate Professor Katharina Gaus from UNSW's Centre for Vascular Research at the Lowy Cancer Research Centre, used Australia's only microscope capable of super-resolution fluorescence microscopy to image the protein molecule-by-molecule to reveal the immunity 'switch'.
The technology is a major breakthrough for science, Dr Gaus said. Currently there are only half a dozen of the 'super' microscopes in use around the world.

"Previously you could see T-cells under a microscope but you couldn't see what their individual molecules were doing," Dr Gaus said.
Using the new microscope the scientists were able to image molecules as small as 10 nanometres. Dr Gaus said that what the team found overturns the existing understanding of T-cell activation.
"Previously it was thought that T-cell signalling was initiated at the cell surface in molecular clusters that formed around the activated receptor.

"In fact, what happens is that small membrane-enclosed sacks called vesicles inside the cell travel to the receptor, pick up the signal and then leave again," she said.
Dr Gaus said the discovery explained how the immune response could occur so quickly.
"There is this rolling amplification. The signalling station is like a docking port or an airport with vesicles like planes landing and taking off. The process allows a few receptors to activate a cell and then trigger the entire immune response," she said.
PhD candidate David Williamson, whose research formed the basis of the paper, said the discovery showed what could be achieved with the new generation of super-resolution fluorescence microscopes.
"In conventional microscopy, all the target molecules are lit up at once and individual molecules become lost amongst their neighbours – it's like trying to follow a conversation in a crowd where everyone is talking at once.

"With our microscope we can make the target molecules light up one at a time and precisely determine their location while their neighbours remain dark. This 'role call' of all the target molecules means we can then build a 'super resolution' image of the sample," he said.
The next step was to pinpoint other key proteins to get a complete picture of T-cell activity and to extend the microscope to capture 3-D images with the same unprecedented resolution.
"Being able to see the behaviour and function of individual molecules in a live cell is the equivalent of seeing atoms for the first time. It could change the whole concept of molecular and cell biology," Mr Williamson said.

Source  EurekaAlert!

Friday, June 3, 2011

Understanding Cancer Energetics

Johns Hopkins researchers solve mystery of Warburg effect .

It's long been known that cancer cells eat a lot of sugar to stay alive. In fact, where normal, noncancerous cells generate energy from using some sugar and a lot of oxygen, cancerous cells use virtually no oxygen and a lot of sugar. Many genes have been implicated in this process and now, reporting in the May 27 issue of Cell, researchers at the Johns Hopkins University School of Medicine have discovered that this so-called Warburg effect is controlled.

"It turns out to be a feed-forward mechanism, where protein A turns on B, which in turn goes back and helps A do more," says Gregg Semenza, M.D., Ph.D., the C. Michael Armstrong Professor of Medicine, director of the vascular program at Johns Hopkins' Institute for Cell Engineering and a member of the McKusick-Nathans Institute of Genetic Medicine. "PKM2 normally functions as an enzyme involved in the metabolism of glucose, but in this case we have demonstrated a novel role in the control of gene expression in cancer cells."
Nearly 20 years ago, Semenza's research team discovered that HIF-1 can turn on a number of genes that that help cells survive when oxygen levels fall too low. In addition to genes that contribute to building new blood vessels, HIF-1 also turns on genes involved in the metabolic process that turns glucose into energy. One of those genes, pyruvate kinase M2 or PKM2, catalyzes the first step of this metabolic process and is present only in cancer cells.

To figure out whether and if HIF-1 and PKM2 interact, the team first engineered cells to have or lack HIF-1. They kept them in high or low oxygen for 24 hours and found that cells starved of oxygen, but containing HIF-1, had more PKM2 than cells without HIF-1, suggesting that HIF-1 controls the production of PKM2.
The team then asked if HIF-1 and PKM2 physically interact with each other by isolating one of the two proteins from cells; they found that pulling one out also resulted in the other coming along for the ride, showing that the two proteins do in fact bind to each other.
Knowing that the primary function of HIF-1 is to bind DNA and turn on specific genes, Semenza's team next asked whether PKM2 somehow helped

HIF-1 do that. They examined genes known to be activated by HIF-1 in low oxygen after the removal of PKM2 and found that without PKM2, less HIF-1 was bound to DNA.
Now armed with evidence that PKM2 helps HIF-1 turn on genes, the team looked at the activity of genes directly involved in the metabolic pathway that burns so much sugar in cancer cells and compared genes known to be activated by HIF-1 with those not affected by HIF-1. Removing PKM2 from cells had no effect on genes not controlled by HIF-1 but reduced the activity of HIF-1-controlled genes.
"These results were really astounding," says Semenza. "In addition to solving the long-standing mystery of the Warburg effect, we also discovered that PKM2 may play a far broader role in promoting cancer progression than has been appreciated before."

This study was funded by the National Heart, Lung and Blood Institute.
Authors on the paper are Weibo Luo, Hongxia Hu, Ryan Chang, Jun Zhong, Matthew Knabel, Robert O'Meally, Robert Cole, Akhilesh Pandey and Gregg Semenza, all of Johns Hopkins.

Source John Hopkins University, School of Medicine

Wednesday, June 1, 2011

Deadly bacteria may mimic human proteins to evolve antibiotic resistance

Analysis of Next-Generation genomewide datasets needed to target development of new drug treatments.

FLAGSTAFF, Ariz. — June 1, 2011 — Deadly bacteria may be evolving antibiotic resistance by mimicking human proteins, according to a new study by the Translational Genomics Research Institute (TGen).
This process of "molecular mimicry" may help explain why bacterial human pathogens, many of which were at one time easily treatable with antibiotics, have re-emerged in recent years as highly infectious public health threats, according to the study published May 26 in the journal Public Library of Science (PLoS) One.
"This mimicry allows the bacteria to evade its host's defense responses, side-stepping our immune system," said Dr. Mia Champion, an Assistant Professor in TGen's Pathogen Genomics Division, and the study's author.

Using genomic sequencing, the spelling out of billions of genetic instructions stored in DNA, the study identified several methyltransferase protein families that are very similar in otherwise very distantly related human bacterial pathogens. These proteins also were found in hosts such as humans, mouse and rat.
Researchers found methyltransferase in the pathogen Francisella tularensis subspecies tularensis, the most virulent form of Francisella. Just one cell can be lethal. Methyltransferase is a potential virulence factor in this pathogen, which causes Tularemia, an infection common in wild rodents, especially rabbits, that can be transmitted to humans though bites, touch, eating or drinking contaminated food or water, or even breathing in the bacteria. It is severely debilitating and even fatal, if not treated.
Similar methyltransferase proteins are found in other highly infectious bacteria, including the pathogen Mycobacterium tuberculosis that causes Tuberculosis, a disease that results in more than 1 million deaths annually. The study also identified distinct methyltransferase subtypes in human pathogens such as Coxiella, Legionella, and Pseudomonas.

In general, these bacterial pathogens are considered "highly clonal," meaning that the overall gene content of each species is very similar. However, the study said, "The evolution of pathogenic bacterial species from nonpathogenic ancestors is … marked by relatively small changes in the overall gene content."
Genomic comparisons were made with several strains of the bacteria, as well as with plants and animals, including humans. The methyltransferase protein also was found to have an ortholog, or similar counterpart, in human DNA. Although the overall sequence of the orthologs is highly similar, the study identifies a protein domain carrying distinct amino acid variations present in the different organisms.

"Altogether, evidence suggests a role of the Francisella tularensis protein in a mechanism of molecular mimicry. Upon infection, bacterial pathogens dump more than 200 proteins into human macrophage cells called 'effector proteins.' Because these proteins are so similar to the human proteins, it mimics them and enables them to interfere with the body's immunity response, thereby protecting the pathogen,'' Dr. Champion said.
"These findings not only provide insights into the evolution of virulence in Francisella, but have broader implications regarding the molecular mechanisms that mediate host-pathogen relationships," she added.
Identifying small differences between the pathogen and human proteins through Next Generation genome-wide datasets could help develop molecular targets in the development of new drug treatments, she said.

Source EurekaAlert!

Tuesday, May 31, 2011

Team solves decades-old molecular mystery linked to blood clotting

CHAMPAIGN, lll. — Blood clotting is a complicated business, particularly for those trying to understand how the body responds to injury. In a new study, researchers report that they are the first to describe in atomic detail a chemical interaction that is vital to blood clotting. This interaction – between a clotting factor and a cell membrane – has baffled scientists for decades.

Above is a movie of the supercomputer simulation of the blood clotting factor interacting with the membrane. The GLA domain of the clotting factor is depicted as a purple tube; individual GLA amino acids are yellow; tightly bound calcium ions are pink spheres; and the interacting phospholipids that make up the membrane are below.

The study appears online in the Journal of Biological Chemistry.
“For decades, people have known that blood-clotting proteins have to bind to a cell membrane in order for the clotting reaction to happen,” said University of Illinois biochemistry professor James Morrissey, who led the study with chemistry professor Chad Rienstra and biochemistry, biophysics and pharmacology professor Emad Tajkhorshid. “If you take clotting factors off the membrane, they’re thousands of times less active.”
The researchers combined laboratory detective work with supercomputer simulations and solid-state nuclear magnetic resonance (SSNMR) to get at the problem from every angle. They also made use of tiny rafts of lipid membranes called nanodiscs, using an approach developed at Illinois by biochemistry professor Stephen Sligar.

Previous studies had shown that each clotting factor contains a region, called the GLA domain, which interacts with specific lipids in cell membranes to start the cascade of chemical reactions that drive blood clotting.
One study, published in 2003 in the journal Nature Structural Biology, indicated that the GLA domain binds to a special phospholipid, phosphatidylserine (PS), which is embedded in the membrane. Other studies had shown that PS binds weakly to the clotting factor on its own, but in the presence of another phospholipid, phosphatidylethanolamine (PE), the interaction is much stronger.

Both PS and PE are abundant in the inner – but not the outer – leaflets of the double-layered membranes of cells. This keeps these lipids from coming into contact with clotting factors in the blood. But any injury that ruptures the cells brings PS and PE together with the clotting factors, initiating a chain of events that leads to blood clotting.
Researchers have developed many hypotheses to explain why clotting factors bind most readily to PS when PE is present. But none of these could fully explain the data.
In the new study, Morrissey’s lab engineered nanodiscs with high concentrations of PS and PE, and conducted functional tests to determine if they responded like normal membranes.
“We found that the nanodisc actually is very representative of what really happens in the cell in terms of the reaction of the lipids and the role that they play,” Morrissey said.

Then Tajkhorshid’s lab used advanced modeling and simulation methods to position every atom in the system and simulated the molecular interactions on a supercomputer. The simulations indicated that one PS molecule was linking directly to the GLA domain of the clotting factor via an amino acid (serine) on its head-group (the non-oily region of a phospholipid that orients toward the membrane surface).
More surprisingly, the simulations indicated that six other phospholipids also were drawing close to the GLA domain. These lipids, however, were bending their head-groups out of the way so that their phosphates, which are negatively charged, could interact with positively charged calcium ions associated with the GLA domain. (Watch a movie of the simulation.)
“The simulations were a breakthrough for us,” Morrissey said. “They provided a detailed view of how things might come together during membrane binding of coagulation factors. But these predictions had to be tested experimentally.”

Rienstra’s lab then analyzed the samples using SSNMR, a technique that allows researchers to precisely measure the distances and angles between individual atoms in large molecules or groups of interacting molecules. His group found that one of every six or seven PS molecules was binding directly to the clotting factor, providing strong experimental support for the model derived from the simulations.
“That turned out to be a key insight that we contributed to this study,” Rienstra said.
The team reasoned that if the PE head-groups were simply bending out of the way, then any phospholipid with a sufficiently small head-group should work as well as PE in the presence of PS. This also explained why only one PS molecule was actually binding to a GLA domain. The other phospholipids nearby were also interacting with the clotting factor, but more weakly.
The finding explained another mystery that had long daunted researchers. A different type of membrane lipid, phosphatidylcholine (PC), which has a very large head-group and is most abundant on the outer surface of cells, was known to block any association between the membrane and the clotting factor, even in the presence of PS.

Follow-up experiments showed that any phospholipid but PC enhanced the binding of PS to the GLA domain. This led to the “ABC” hypothesis: when PS is present, the GLA domain will interact with “Anything But Choline.”
“This is the first real insight at an atomic level of how most of the blood-clotting proteins interact with membranes, an interaction that’s known to be essential to blood clotting,” Morrissey said. The findings offer new targets for the development of drugs to regulate blood clotting, he said.
Morrissey and Tajkhorshid have their primary appointments in the U. of I. College of Medicine. Tajkhorshid also is an affiliate of the Beckman Institute at Illinois.
The National Heart, Lung and Blood Institute and the National Institute for General Medical Sciences provided funding for this study.

Source University of Illinois